species:   Artha
pid:       MI0005415
parent:    ath-MIR854d
paralog:   
locus:     5:11689861-11690081
matures:   ['GAUGAGGAUAGGGAGGAGGAG', 'UCUCUUCUACCACAGCUAUUCCG']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 5:11689861-11690081

5 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

***********************                                                                                                                                                                             *************************
CGGAUGAGGAUAGGGAGGAGGAGUAUGAUACGAGCAUGUAUCAUUUCAGUGAGCACGUACCUCCAGCGCGGGAGAGCAAGAGCUUGAGUGAAGCUCACAGAAACAACAGUAAGUUGCAGAGGUGGUGCAAGAAACAAGAUAGGUUACUUAUCAAGUGCUUCAAGGCCAUCACGUUUCUGACGGACAAGAUAAGUUGCUUCUCUUCUACCACAGCUAUUCCG
((((..((.....((((((((((((((((((......)))))).........((((.((((((....((......))..((((((.....)))))).......((((.....))))..)))))))))).................(((((((..((.(.(((((((......)))).))).).))..))))))))))))))))))).......))..))))
--GAUGAGGAUAGGGAGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 c
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUUCUACCACAGCUAUUCCG l=23 a=0 c*
--GAUGAGGAUAGGGAGGAGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ l=21 a=0 ma
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCUCUUCUACCACAGCUAUUCCG l=23 a=0 ma*


No alignments to locus

mb-01011
ax-1001011
ku-01
ss-000110001100
fn-001
